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2021-09-22 at 6:00 pm #31512Mingkhwan VithayaverojParticipant
What intervention(s) you are considering in your modelling?
– I chose the lockdown intervention. It is the intervention that most governments around the world chose to deal with the Covid-19 pandemic and is not difficult to understand for a simple model one.
How it will be added to the model structure?
– by the different beta for the SIRD model, I pick the base number from Luangwilai et al. (2020), they have beta = 0.2169, then I assume that lockdown has 20 and 25 per cent efficiency in the same situation. so beta will decrease with 20 and 25 per cent.What are the characteristics of the intervention(s)?
– lockdown is the intervention that targets to decrease beta. -
2021-09-18 at 1:23 am #31392Mingkhwan VithayaverojParticipant
#Infection and death rate of COVID-19 with and without intervention.
#I think I will choose lockdown intervention for this report.library(deSolve)
SIRD.dyn <- function(t,var,par) {
S <- var[1]
I <- var[2]
R <- var[3]
D <- var[4]N <- S+I+R+D
beta <- par[1]
gamma <- par[2]
alpha <- par[3]dS <- -beta*S*I/N
dI <- beta*S*I/N – gamma*I – alpha*I
dR <- gamma*I
dD <- alpha*Ilist(c(dS,dI,dR,dD))}
#There will be 2 groups of these below data for with and without intervention.
beta <- 0.2169 #infection rate
gamma <- 0.0267 #recovery rate
alpha <- 0.00065353 #death rateSIRD.par <- c(beta,gamma,alpha)
SIRD.init <- c(2762, 1, 0,0)
SIRD.t <- seq(0, 500, by = 1)
SIRD.sol <- lsoda(SIRD.init,SIRD.t,SIRD.dyn,SIRD.par)TIME <- SIRD.sol[,1]
S <- SIRD.sol[,2]
I <- SIRD.sol[,3]
R <- SIRD.sol[,4]
D <- SIRD.sol[,5]N <- S+I+R+D
library(ggplot2)
SIRD.sol2 <- as.data.frame(SIRD.sol)
ggplot(SIRD.sol2,aes(x = TIME))+
geom_line(aes(y = S,colour=”Susceptible”))+
geom_line(aes(y = I,colour=”Infected”))+
geom_line(aes(y = R,colour=”Recovered”))+
geom_line(aes(y = D,colour=”Death”))+
xlab(label = “Time”)+theme_classic()+
theme(legend.justification=c(1,0), legend.position = c(1,0.5))+ theme(legend.title = element_blank(), legend.background = element_blank(), legend.text = element_text(size = 10), legend.key = element_rect(colour=”#FFFFFF”, fill = ‘#C2C2C2’, size = 0.25, linetype = “solid”))+
scale_colour_manual(breaks=c(“Susceptible”,”Infected”,”Recovered”,”Death”), values=c(“blue”,”red”,”darkgreen”,”purple”))
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2021-09-07 at 2:54 pm #31205Mingkhwan VithayaverojParticipant
Topic:
Cost-effectiveness of COVID-19 lockdown on nation economy: difference-in-differences method.Rationale:
In March-April 2020, both UK and Thailand have many similar situations in the COVID-19 pandemic, such as the trend in the proportion of new case infectious/population. They also have nation lockdown but are different in detail. The United Kingdom forces all-day lockdown, except for some necessary activities. At the same time, Thailand closed some dangerous places but ordered the prevention to leave the residence just from 10 pm to 4 am. This difference leads to the question: Are differences in lockdown between The United Kingdom and Thailand cost-effective, both on COVID-19 prevention and economy?Research Question:
Are differences in lockdown between The United Kingdom and Thailand cost-effective, both on COVID-19 prevention and economy?Rough Framework:
Rough FrameworkReferences:
#Difference-in-Differences Method
Goodman-Bacon and Marcus (2020). Using Difference-in-Differences to Identify Causal Effects of COVID-19 Policies.#Covid prevention and Economy
Gathergood and Guttman-Kenney (2021). The English Patient: Evaluating Local Lockdowns Using Real-Time COVID-19 & Consumption Data.Allen (2021). Covid Lockdown Cost/Benefits: A Critical Assessment of the Literature.
Zhang et al. (2021) Modeling coupling dynamics between the transmission, intervention of COVID-19 and economic development.
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2021-09-27 at 3:36 pm #31681Mingkhwan VithayaverojParticipant
Thank you so much for your advice. I have reviewed the lecture again and get a better understanding. 😀
I do some plot again here >> incidence
I think that I will increase more efficiency variations, maybe it can see more about impact.
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2021-09-22 at 5:47 pm #31508Mingkhwan VithayaverojParticipant
thank you so much ka ajarn.
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2021-09-22 at 5:44 pm #31507Mingkhwan VithayaverojParticipant
yes, I think lockdown can simply reduce beta, but with many assumptions for a simple model.
here I try to plot Infecteds with the different beta, maybe it can explain the concept.
I plot with assumptions that lockdown has 20 and 25 per cent efficiency.
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